cBioPortal OncoPrint MCP
Supports UIby noneedofit
Renders interactive cBioPortal OncoPrint and study summary visualizations directly inside AI chat clients.
What it does
This MCP App connects AI assistants to cBioPortal, allowing them to render complex genomic data visualizations. It specifically focuses on OncoPrints (gene x sample alteration grids) and study summaries, transforming raw cancer genomics data into interactive React UIs within the chat interface.
Key features
- Interactive OncoPrints: Visualizes gene alterations across multiple samples using live data from the cBioPortal REST API.
- Study Summaries: Renders metadata cards providing a high-level molecular profile coverage of specific cancer studies.
- Live API Integration: Pulls real-time genomic data, ensuring the AI provides the most current biological insights.
- React-based UI: High-fidelity visualizations that go beyond simple text descriptions.
Installation
- Claude Desktop: Add to
claude_desktop_config.json:
{
"mcpServers": {
"cbio-oncoprint": {
"command": "npm",
"args": ["run", "start:server"],
"cwd": "/path/to/cbio-oncoprint-mcp"
}
}
}
Supported hosts
- Claude
Quick install
npm install && npm run build && npm run start:serverInformation
- Pricing
- free
- Published
- 5/4/2026
- stars
- 0
Categories
Choose your AI client and follow the steps below.
Claude Desktop
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