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cBioPortal OncoPrint MCP
Supports UIby noneedofit
Renders interactive cBioPortal OncoPrint and study summary visualizations directly inside AI chat clients.
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Works in:claude
Exposes:Resources
What it does
This MCP App connects AI assistants to cBioPortal, allowing them to render complex genomic data visualizations. It specifically focuses on OncoPrints (gene x sample alteration grids) and study summaries, transforming raw cancer genomics data into interactive React UIs within the chat interface.
Key features
- Interactive OncoPrints: Visualizes gene alterations across multiple samples using live data from the cBioPortal REST API.
- Study Summaries: Renders metadata cards providing a high-level molecular profile coverage of specific cancer studies.
- Live API Integration: Pulls real-time genomic data, ensuring the AI provides the most current biological insights.
- React-based UI: High-fidelity visualizations that go beyond simple text descriptions.
Installation
- Claude Desktop: Add to
claude_desktop_config.json:
{
"mcpServers": {
"cbio-oncoprint": {
"command": "npm",
"args": ["run", "start:server"],
"cwd": "/path/to/cbio-oncoprint-mcp"
}
}
}
Supported hosts
- Claude
Quick install
npm install && npm run build && npm run start:serverInformation
- Pricing
- free
- Published
- 5/4/2026
- stars
