MCP App StoreMCP App Store
from Agentic Science Builder Collections10
Fetch, extract, and standardize GNPS molecular networking job archives for NPLinker integration.
This skill automates the preparation of GNPS (Global Natural Products Social Molecular Networking) molecular networking job archives for downstream use in NPLinker or similar metabolomics-genomics integration pipelines.
GNPSDownloader to fetch job archives using GNPS task IDs from both GNPS1 and GNPS2 workflows.GNPSExtractor to decompress archives and identify the specific workflow type (e.g., METABOLOMICS-SNETS, FEATURE-BASED-MOLECULAR-NETWORKING).spectra.mgf, molecular_families.tsv, annotations.tsv, and file_mappings.tsv/.csv.Researchers working with LC-MS metabolomics and genomics data who need to integrate molecular networking results into natural products discovery pipelines.
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