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Query ChEMBL programmatically to retrieve bioactive molecule data, bioactivity measurements, targets, and perform similarity/substructure searches for drug disc
A skill that surfaces programmatic access patterns to the ChEMBL bioactivity database via the official Python client. Useful for medicinal chemistry, target/ligand lookups, activity extraction (IC50, Ki, EC50), SAR analysis, and structure-based searches.
find potent inhibitors for EGFR → returns candidate molecule IDs and bioactivity recordssimilarity search for SMILES ... → returns similar compounds and their activitiesThis skill has not been reviewed by our automated audit pipeline yet.
Scientific Schematics & Diagrams
Generate publication-quality scientific diagrams via AI with iterative quality review and smart regeneration for journal, conference, poster, and presentation o
Writing Hookify Rules
Guides creating Hookify rule files (.claude/hookify.*.local.md) to detect patterns (dangerous commands, secrets, debug logs) and show warnings or block actions.
BRENDA Database Client
Access the BRENDA enzyme database via SOAP API to retrieve kinetic parameters, reactions, organism data, and substrate-specific enzyme information.
Hook Development for Claude Code Plugins
Guidance and patterns for creating event-driven hooks (PreToolUse, PostToolUse, Stop, SessionStart, etc.) for Claude Code plugins and projects.
Coding Standards & Best Practices
Opinionated, language-agnostic coding standards and best practices focused on TypeScript/JavaScript/React to improve readability, safety, and maintainability.
React State Management
Practical guide to choosing and implementing modern React state solutions (Redux Toolkit, Zustand, Jotai, React Query) for local, global, and server state.
Game Design Principles
Practical game design guidance: core loop, GDD structure, player psychology, balancing, and progression patterns for prototyping and documenting games.
RWKV Architecture
Provides guidance and workflows for RWKV, a Transformer+RNN hybrid that enables linear-time inference and effectively unlimited context for long-sequence and st
Zapier & Make Patterns
Guidance and patterns for building reliable no-code automations in Zapier and Make, with anti-patterns and failure modes to avoid.
LangGraph
Guides building production-grade, stateful agent graphs with LangGraph: state, reducers, routing, persistence, and human-in-the-loop patterns for robust multi-n
Seq Wrangler
Sequence data QC, trimming, alignment, and BAM processing pipeline helper — wraps FastQC, fastp/Trimmomatic, BWA/Bowtie2/Minimap2, and SAMtools for automated re
ToolUniverse Gateway
Unified agent gateway to 1000+ scientific tools (bioinformatics, drug discovery, genomics) via Harvard's ToolUniverse, returning JSON for downstream workflows.
MatchMS (mass spectrometry processing)
Mass spectrometry data processing: import/export mzML/MGF/MSP, filter and normalize spectra, compute spectral similarity (cosine/modified cosine), and build rep
KEGG Pathway Enrichment (clusterProfiler)
Run KEGG pathway and module enrichment using clusterProfiler (enrichKEGG/enrichMKEGG) to find metabolic and signaling pathways over-represented in a gene list.
Network Toxicology & Docking Research Planner
Generates four-tier network toxicology + molecular docking study designs (Lite → Publication+) with step-by-step workflows, validation strategies, figure plans,
Bizard — Biomedical Visualization Atlas
A comprehensive atlas of biomedical data visualization tutorials and examples (R/Python/Julia) that provides reproducible code and guidance for plots used in bi
Bismark Methylation Calling
Extract per-cytosine methylation calls (CpG/CHG/CHH) from Bismark-aligned BAMs and produce bedGraph/coverage reports for downstream analysis.
E.Copi — Scientific Multi-Agent System
Multi-expert scientific agent for drug discovery and biomedical research that instantiates domain specialists, integrates multimodal evidence, and generates ana