SKILL.md packages that extend Claude Code, Cursor, Copilot, and other AI agents.
Tags

awesome-agent-skills-for-empirical-research
Guidance and reference for the marginaleffects R/Python package: computing predictions, comparisons, slopes, and average treatment effects with practical exampl

bioskills
Run KEGG pathway and module enrichment using clusterProfiler (enrichKEGG/enrichMKEGG) to find metabolic and signaling pathways over-represented in a gene list.

aaas-vault
Guides data-analytics workflows to compute and interpret statistical significance, with step-by-step calculations, code snippets, and validation checks.

tidy-r-skill
Guidance and patterns for modern tidyverse R: native pipe, dplyr 1.2+ APIs, tidyselect, recoding, and migration from legacy R code.

agent-almanac
Generate multiple customized reports from one Quarto or R Markdown template by supplying parameter sets and automating batch renders.

ukbanalytica_v2
Generate scripts and workflows to run subgroup interaction tests and sensitivity analyses (lag, complete-case) for UK Biobank RAP cohorts; returns aggregate out